dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04073
Location and strand information: 12770 - 14263 (+)
Family: GH13_31|GH13_23|GH13
Protein type: CAZyme
Protein description: Oligo-1,6-glucosidase
Protein isoelectric point: 4.8525
Protein molecular weight: 58965.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04074
Location and strand information: 14293 - 15279 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04075
Location and strand information: 15296 - 16381 (+)
Family: GH130
Protein type: CAZyme
Protein description: 4-O-beta-D-mannosyl-D-glucose phosphorylase
Protein isoelectric point: 4.4953
Protein molecular weight: 40465.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04076
Location and strand information: 16717 - 17904 (+)
Family: 2.A.36.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04077
Location and strand information: 18131 - 18559 (+)
Family: null
Protein type: null
Protein description: Toxin-antitoxin biofilm protein TabA

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04078
Location and strand information: 18980 - 20512 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04079
Location and strand information: 20527 - 21468 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04080
Location and strand information: 21481 - 22368 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04081
Location and strand information: 22391 - 24049 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04082
Location and strand information: 24143 - 26479 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04083
Location and strand information: 26466 - 27491 (+)
Family: GH33
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7675
Protein molecular weight: 38517.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04084
Location and strand information: 27535 - 30675 (+)
Family: GH0|GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0475
Protein molecular weight: 120807.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04085
Location and strand information: 30723 - 31643 (+)
Family: null
Protein type: null
Protein description: 4-hydroxy-tetrahydrodipicolinate synthase

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04086
Location and strand information: 31857 - 32717 (+)
Family: null
Protein type: null
Protein description: 5,10-methylenetetrahydrofolate reductase

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04087
Location and strand information: 32864 - 34750 (+)
Family: GH25
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3601
Protein molecular weight: 71510.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04088
Location and strand information: 35428 - 37266 (+)
Family: SBP_bac_5
Protein type: STP
Protein description: Oligopeptide-binding protein SarA

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04089
Location and strand information: 37326 - 38264 (+)
Family: 3.A.1.5.19
Protein type: TC
Protein description: Dipeptide transport system permease protein DppB

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04090
Location and strand information: 38265 - 39239 (+)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Dipeptide transport system permease protein DppC

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04091
Location and strand information: 39248 - 40285 (+)
Family: 3.A.1.5.19
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04092
Location and strand information: 40287 - 41255 (+)
Family: 3.A.1.5.25
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04093
Location and strand information: 41359 - 41883 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04094
Location and strand information: 42041 - 43009 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.2289
Protein molecular weight: 37610.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003355_180|CGC1
Gene ID: MGYG000003355_04095
Location and strand information: 43011 - 43949 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.1715
Protein molecular weight: 36786.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is starch download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003355_04073	Oligo-1,6-glucosidase	CAZyme	12770	14263	+	GH13_31\| GH13_23\| GH13
MGYG000003355_04074	HTH-type transcriptional repressor CytR	TF	14293	15279	+	LacI
MGYG000003355_04075	4-O-beta-D-mannosyl-D-glucose phosphorylase	CAZyme	15296	16381	+	GH130
MGYG000003355_04076	hypothetical protein	TC	16717	17904	+	2.A.36.2.1
MGYG000003355_04077	Toxin-antitoxin biofilm protein TabA	null	18131	18559	+	DUF386
MGYG000003355_04078	hypothetical protein	null	18980	20512	+	DUF5060\| DUF4038\| DUF5605
MGYG000003355_04079	putative multiple-sugar transport system permease YteP	TC	20527	21468	+	3.A.1.1.10
MGYG000003355_04080	L-arabinose transport system permease protein AraQ	TC	21481	22368	+	3.A.1.1.10
MGYG000003355_04081	hypothetical protein	STP	22391	24049	+	SBP_bac_1
MGYG000003355_04082	HTH-type transcriptional activator RhaS	TF	24143	26479	+	HTH_AraC
MGYG000003355_04083	hypothetical protein	CAZyme	26466	27491	+	GH33
MGYG000003355_04084	hypothetical protein	CAZyme	27535	30675	+	GH0\| GH106
MGYG000003355_04085	4-hydroxy-tetrahydrodipicolinate synthase	null	30723	31643	+	DHDPS
MGYG000003355_04086	5,10-methylenetetrahydrofolate reductase	null	31857	32717	+	MTHFR
MGYG000003355_04087	hypothetical protein	CAZyme	32864	34750	+	GH25
MGYG000003355_04088	Oligopeptide-binding protein SarA	STP	35428	37266	+	SBP_bac_5
MGYG000003355_04089	Dipeptide transport system permease protein DppB	TC	37326	38264	+	3.A.1.5.19
MGYG000003355_04090	Dipeptide transport system permease protein DppC	TC	38265	39239	+	3.A.1.5.2
MGYG000003355_04091	Oligopeptide transport ATP-binding protein OppD	TC	39248	40285	+	3.A.1.5.19
MGYG000003355_04092	Oligopeptide transport ATP-binding protein OppF	TC	40287	41255	+	3.A.1.5.25
MGYG000003355_04093	hypothetical protein	null	41359	41883	+	DUF6465
MGYG000003355_04094	hypothetical protein	CAZyme	42041	43009	+	GT2
MGYG000003355_04095	hypothetical protein	CAZyme	43011	43949	+	GT2
Protein ID	Protein Name	Type	Start	End	Strand	Signature